The concentrations of cloud condensation nuclei (CCN) modulate cloud properties, rainfall location and intensity, and climate forcings. This work assesses uncertainties in CCN measurements and the apparent hygroscopicity parameter (κ app ) which is widely used to represent CCN populations in climate models. CCN measurements require accurate operation of three instruments: the CCN instrument, the differential mobility analyzer (DMA), and the condensation particle counter (CPC). Assessment of DMA operation showed that varying the ratio of aerosol to sheath flow from 0.05 to 0.30 resulted in discrepancies between the κ app values calculated from CCN measurements and the literature value. Discrepancies were found to increase from effectively zero to 0.18 for sodium chloride, and from effectively zero to 0.08 for ammonium sulfate. The ratio of excess to sheath flow was also varied, which shifted the downstream aerosol distribution towards smaller particle diameters (for excess flow < sheath flow) or larger particle diameters (for excess flow > sheath flow) than predicted. For the CPC instrument, undercounting occurred at high concentrations, resulting in calculated κ app lower than the literature values. Lastly, undercounting by CCN instruments at high concentration was also assessed, taking the effect of supersaturation on counting efficiency into account. Under recommended operating conditions, the combined DMA, CPC, and CCN uncertainties in κ app are 1.1 % or less for 25 to 200 nm diameter aerosols.